Peer-Reviewed Conference Abstracts
2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2001 | 1999 | 1998 | 1997 | 1996 | 1992 | 1990
DC Lin, DI Shreiber, EK Dimitriadis, F Horkay. (2009) Cells and Gels: A Comparison of Indentation Behavior. In Biophysical Journal 96(3):398a. PDF
S. Karama, Y. Ad-Dab'bagh, R.J. Haier, I.J. Deary, O.C. Lyttelton, C. Lepage, A.C. Evans and the Brain Development Cooperative Group. Erratum to "Positive association between cognitive ability and cortical thickness in a representative US sample of healthy 6 to 18 year-olds." In Intelligence 2009 37:432–442. PDF
Basser, P.J. (2009) Diffusion MRI: Past, Present, and Future. In 50th ENC, Pacific Grove, California. March 29–April 3, 2009. PDF
Koay, C.G., Özarslan, E., and Basser, P.J. (2009) Breaking the noise floor: A framework for correcting the noise-induced bias in noisy magnitude MR signals. In 50th ENC, Pacific Grove, California. March 29–April 3, 2009. PDF
Walker, L., Chang, L-C., Kanterakis, E., Bloy, L., Simonyan, K., Verma, R., and C. Pierpaoli. (2009) Statistical Assessment of the Effects of Physiological Noise and Artifacts in a Population Analysis of Diffusion Tensor MRI Data. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 459. PDF
Sagi, Y., Basser, P.J., and Assaf, Y. (2009) Estimation of Cell Size Using the Composite Hindered and Restricted Model of Diffusion. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 1390. PDF
J. E. Sarlls, and C. Pierpaoli. (2009) Micro-architectural Features of the In Vivo Human Optic Chiasm. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 1455. PDF
E. Özarslan. (2009) MR characterization of compartment shape anisotropy (CSA). In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 453. PDF
W. R. Jarisch, E. Özarslan, and P. J. Basser. (2009) Computed Tomographic (CT) Reconstruction of the Average Propagator from Diffusion Weighted MR Data. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 1393. PDF
C. Poynton, M. Jenkinson, C. Pierpaoli, and W. Wells III. (2009) Fieldmap-Free Retrospective Registration and Distortion Correction for EPI-based Diffusion-Weighted Imaging. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 2780. PDF
C. Koay, E. Özarslan, and P. J. Basser. (2009) A framework for correcting the noise-induced bias in noisy magnitude MR signals. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 4692. PDF
N. Shemesh, E. Özarslan, P. J. Basser, and Y. Cohen. (2009) Measuring small compartmental dimensions with low-q angular double-PGSE NMR. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 4692. PDF
O. Pasternak, N. Sochen, and P. J. Basser. (2009) Metric Selection and Variability Maps for Diffusion Tensor Data. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 3579. PDF
Carlo Pierpaoli. (2009) How to do a DTI multi-center neuroimaging study. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. PDF
C. Koay, E. Özarslan, and C. Pierpaoli. (2009) Simultaneous identification of noise and estimation of noise standard deviation in MRI. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 4691. PDF
C. Pierpaoli, J. Sarlls, U. Nevo, P. J. Basser, and F. Horkay. (2009) Polyvinylpyrrolidone (PVP) water solutions as isotropic phantoms for diffusion MRI studies. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 1414. PDF
L-C. Chang, L. Walker, and C. Pierpaoli. (2009) Making the Robust Tensor Estimation Approach: "RESTORE" more Robust. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 3557. PDF
E. Özarslan, C. Koay, and P. J. Basser. (2009) q-space MR propagator in partially-restricted, axially-symmetric and isotropic environments. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18–24, 2009. 1366. PDF
E. Özarslan, C. Koay, T. M. Shepherd, S. J. Blackband, and P. J. Basser. (2009) Simple harmonic oscillator based reconstruction and estimation for three-dimensional q-space MRI. In ISMRM 17th Annual Meeting and Exhibition, Honolulu, Hawai'i. April 18– 24, 2009. 1396. PDF
Salvador, R., Silva, S., Basser, P.J., Miranda, P. (2008) A simulation study of the mechanisms that govern direct activation of neurons in the motor cortex by transcranial magnetic stimulation. Third International Goettingen Conference on TMS and tDCS, Goettingen, Germany. PDF
Salvador, R., Silva, S., Miranda, P., Basser, P.J. (2008) A simulation study of the mechanisms that govern direct activation of pyramidal tract neurons by transcranial magnetic stimulation. BioMag 2008, Hokkaido, Japan. PDF
Deoni, S.C.L., Rutt, B.K., Pierpaoli, C., and Jones, D.K. Multi-component relaxometry and myelin water fraction imaging with gradient recalled acquisition in the steady state. In Alzheimer's and Dementia 4:T78–T79. PDF
Horkay, F. Ion- and pH-dependent Volume Transitions in Biopolymer Gels. American Physical Society Conference, New Orleans, LA, March 10-14, 2008. PDF
Horkay, F.; Basser, P.J. Ion-driven Volume Transitions in DNA Gels. 235th ACS National Meeting, New Orleans, LA. April 6-10, 2008. Polym. Division. Abstracts. PDF
Horkay, F.; Basser, P.J.; Hecht, A.M.; Geissler, E. Counterion and pH-Mediated Structural Changes in Charged Biopolymer Gels. Polymer Networks 2008, Larnaca, Cyprus, June 22-26, 2008. PDF
Geissler, E.; Hecht, A.M.; Horkay, F. Scaling Behavior of Hyaluronic Acid in Solution with Mono and Divalent Ions. Polymer Networks 2008, Larnaca, Cyprus, June 22-26, 2008.
Horkay, F.; Basser, P.J. Ion Sensitivity of DNA Gel Structure. 236th ACS National Meeting, Philadelphia, PA. August 17-21, 2008. Polym. Division. Abstracts. PDF
Horkay F.; Lin D.; Horkayne-Szakaly I.; Silva C.; Dimitriadis E,K.; Basser P.J. Structure and Macromolecular Organization of Cartilage Proteoglycans. 236th ACS National Meeting, Philadelphia, PA. August 17-21, 2008. Biotechnology Division. Abstracts.
J. Sarlls and C. Pierpaoli. (2008) Sub-millimeter Voxel Diffusion Tensor Imaging of the Optic Chiasm. In 14th Annual Meeting of the Organization for Human Brain Mapping. PDF
L. Walker, J. Yang, X. Wu, K. Simonyan, R. Verma, and C. Pierpaoli. (2008) Regional Distribution of Outliers Across a Population of Diffusion MRI in Human Brain. In 14th Annual Meeting of the Organization for Human Brain Mapping. PDF
P.J. Basser. (2008) Neural tissue as porous media. In 9th International Bologna Conference on Magnetic Resonance in Porous Media p. 18. PDF
E. Özarslan and P. J. Basser. (2008) Microscopic anisotropy revealed by double-PFG NMR. In 9th International Bologna Conference on Magnetic Resonance in Porous Media p. 26. PDF
E. Özarslan, C. G. Koay and P. J. Basser. (2008) Double-PFG diffusion-diffraction in ellipsoidal pores. In 9th International Bologna Conference on Magnetic Resonance in Porous Media p. 115. PDF
E. Özarslan, C. G. Koay and P. J. Basser. (2008) Accurate RTOP estimation from PFG-NMR signal. In 9th International Bologna Conference on Magnetic Resonance in Porous Media p. 116. PDF
D.C. Lin, D.I. Shreiber, E.K. Dimitriadis, and F. Horkay. (2008) A hyperelastic contact model for the indentation of chondrocytes and cartilage extracellular matrix. In Proceedings of the ASME Summer Bioengineering Conference [on CD-ROM], Abstract No. SBC2008-191631. PDF
L-C. Chang, C. Koay, P. J. Basser, and C. Pierpaoli. (2008) Accurate Estimation of T1 from SPGR Signals. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 3048. PDF
I. R. Leppert, C. R. Almli, R. C. McKinstry, R. V. Mulkern, C. Pierpaoli, M. J. Rivkin, and G. B. Pike. (2008) T2 Relaxometry of Normal Pediatric Brain Development. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 2047. PDF
M. Wu, A. S. Barnett, S. Marenco, L. Walker, H. Lemaitre, and C. Pierpaoli. (2008) Comparison of EPI Distortion Correction Methods in Diffusion Tensor MRI. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 1829. PDF
J. E. Sarlls, S. Marenco, and C. Pierpaoli. (2008) DTI of the Human Brain with Sub-millimeter Voxel Size: Clear Depiction of Fiber Decussation in the Optic Chiasm. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 1817. PDF
C. Koay, and P. J. Basser. (2008) The Elliptical Cone of Uncertainty in Diffusion Tensor Imaging and Its Normalized Measures. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 1783. PDF
R. Z. Freidlin, E. Özarslan, P. J. Basser, and C. Pierpaoli. (2008) Parsimonious Model Selection for DTI Tissue Segmentation and Classification Applied to Clinical Data. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 1782. PDF
M. E. Komlosh, M. J. Lizak, F. Horkay, R. Z. Freidlin, and P. J. Basser. (2008) Observation of microscopic diffusion anisotropy in the spinal cord using double-pulsed gradient spin echo MRI. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 763. PDF
J. E. Sarlls, and C. Pierpaoli. (2008) High-resolution Diffusion Tensor Imaging at 3T with Radial-FSE. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 758. PDF
D. Barazany, P. J. Basser, and Y. Assaf. (2008) In-vivo Measurement of the Axon Diameter Distribution in the Rat’s Corpus Callosum. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 567. PDF
S. C. Deoni, B. K. Rutt, T. Arun, C. Pierpaoli, and D. K. Jones. (2008) Gleaning Multi-Component T1 and T2 Information from Steady-State Imaging Data. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 240. PDF
L. Walker, J. Yang, X. Wu, K. Simonyan, R. Verma, and C. Pierpaoli. (2008) Regional Distribution of Outliers of Diffusion MRI in the Human Brain. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 139. PDF
E. Özarslan, C. G. Koay, and P. J. Basser. (2008) Simple harmonic oscillator based estimation and reconstruction for one-dimensional q-space MR. In Proc. Intl. Soc. Mag. Reson. Med. 16. p. 35. PDF
Barazany, D., Basser, P., and Assaf, Y. (2007) AxCalibur — in-vivo measurement of axon diameter distribution with MRI. In 16th Annual Meeting of The Israel Society for Neuroscience, Eilat, Israel. November 25–27, 2007. p. 8–9. PDF
Horkay, F. (2007) Biopolymer Solutions and Gels: Structural and Thermodynamic Properties. Telluride Workshop on Polymer Physics, Telluride, CO. August 6–11, 2007. PDF
Koepp, M.J., Basser, P.J., Catani, M. Imaging brain connectivity. EPILEPSIA Vol. 48, p. 409, Suppl. 6, OCT 2007.
Horkay, F; Basser, P.J. Effect of Ions on the Thermodynamic Properties of Polymer Gels. 233rd ACS National Meeting, Chicago, IL. March 24-29, 2007. Polymeric Materials: Science & Engineering, Vol. 96, 950-951 (2007).
Horkay, F. Ion/Polymer Interactions in Polyelectrolyte Gels. ANTEC 2007 Meeting, Cincinnati, OH. May 6-10, 2007. ANTEC Book. PDF
Washburn, N.A.; Bencherif, S.A.; Srinivasan, A.; Hollinger, J.; Horkay, F.; Matyjaszewski, K. Synthesis and Characterization of Highly Crosslinked Hyaluronan Hydrogels. 234th ACS National Meeting, Boston, MA. August 19-23, 2007. PDF
Horkay, F. Biopolymer Gels and Ions. 234th ACS National Meeting, Boston, MA. August 19-23, 2007. Polymeric Materials: Science & Engineering, 97, 314-315 (2007).
Horkay, F. Nanoscale Structure, Phase Behavior and Macroscopic Properties of Biopolymer Gels. 9th Conference on Colloid Chemistry, Colloids for Nano- and Biotechnology, Siofok, Hungary, October 3-5, 2007. Abstracts. PDF
Basser, P.J.; Lin, D.C.; Silva, C.; Horkayne-Szakaly, I.; Horkay, F. A Polymer Physics/Materials Science Approach to Explain the Material Properties of Cartilage. MRS Fall Meeting, Biomimetic Polymers and Gels, November 26-30, 2007, Boston, MA. Abstracts.
C. Koay, L-C. Chang, C. Pierpaoli, and P. J. Basser. (2007) Diffusion Tensor Representations and Their Applications to DTI Error Propagation. In Proc. Intl. Soc. Mag. Reson. Med. 15. p 1587. PDF
C. Koay, L-C. Chang, and P. J. Basser. (2007) The Cone of Uncertainty is Elliptical: Implications for DTI Tractography. In Proc. Intl. Soc. Mag. Reson. Med. 15. p. 1602. PDF
U. Nevo, M. Komlosh, E. Ozarslan, C. G. Koay, and P. J. Basser. (2007) The effect of linear and micro-circular shear flow on diffusion MR measurements. In Proc. Intl. Soc. Mag. Reson. Med. 15. p. 1603. PDF
C. Koay, L-C. Chang, S. Deoni, and C. Pierpaoli. (2007) An Optimal Framework for T1 Estimation in An SPGR Acquisition. In Proc. Intl. Soc. Mag. Reson. Med. 15. p. 1794. PDF
Chang L-C., and Pierpaoli C. (2007) Improving the Accuracy of Diffusion MR Tractography Using RESTORE. In Proc. Annual Biomedical Engineering Meeting. Taiwan, Dec, 2007. p. 224-226. PDF
Chang L-C., Koay C.G., Deoni S., and Pierpaoli C. (2007) Comparison of Linear and Non-linear Fitting Methods for Estimating T1 from SPGR Signals. In Proc. Intl. Soc. Mag. Reson. Med. 15, p. 3715. PDF
Wu M., Chang L-C., Barnett A. S., Marenco S., and Pierpaoli C. (2007) A Framework for Evaluating the Performance of EPI Distortion Correction Strategies in Diffusion Tensor MRI. In Proc. Intl. Soc. Mag. Reson. Med. 15, p. 1591. PDF
U. Nevo, M. Komlosh, E. Özarslan, P.J. Basser. (2007) Modeling the effect of micro-streaming on DWI data. In Science Networking Development Scheme Meeting. Ein-Boqeq, Israel. PDF
B. Jian, B. C. Vemuri, E. Özarslan, P. Carney and T. Mareci. (2007) A continuous mixture of tensors model for diffusion-weighted MR signal reconstruction. In Proc. of IEEE International Symposium on Biomedical Imaging: Macro to Nano 4. p. 772-775. PDF
E. Özarslan, L-C. Chang, C. Pierpaoli and P. J. Basser. (2007) Roughness: A reshuffling-variant differential geometric index for DWI. In Proc. Intl. Soc. Mag. Reson. Med. 15. p. 1517. PDF
E. Özarslan, T. M. Shepherd, P. J. Basser, B. C. Vemuri and S. J. Blackband. (2007) Novel MRI contrast in nervous tissue based on the observation of anomalous diffusion. In Proc. Intl. Soc. Mag. Reson. Med. 15. p. 819. PDF
B. Jian, B. C. Vemuri, E. Özarslan, P. Carney and T. Mareci. (2007) A novel tensor distribution model for the diffusion weighted MR signal. In Proc. Intl. Soc. Mag. Reson. Med. 15. p. 904. PDF
E. Özarslan, U. Nevo and P. J. Basser. (2007) On the observation of (remote) anisotropy due to macroscopic restrictions. In The 9th International Conference on Magnetic Resonance Microscopy, Aachen, Germany. PDF
P.J. Basser, T. Blumenfeld, G. Levin, Y. Yovel, and Y. Assaf. (2007) AxCaliber: an MRI method to measure the diameter distribution and density of axons in neuronal tissue. In Magnetic Resonance Imaging 25. 550. PDF
E. Özarslan and P.J. Basser. (2007) Diffusion-Diffraction Phenomenon in multi-PFG experiments. In Science Networking Development Scheme Meeting. Ein-Boqeq, Israel. PDF
U. Nevo, C.V. Stewart, E.D. Gireesh, D. Plenz, and P.J. Basser. (2007) Studying the Cellular Sources of the DW-MRI signal with Organotypic cultures. In Science Networking Development Scheme Meeting. Ein-Boqeq, Israel. PDF
P.J. Basser. (2007) Diffusion MRI of Brain Connectivity and Microstructure: The Reality, the Hype, and the Hope. In Science Networking Development Scheme Meeting. Ein-Boqeq, Israel. PDF
U. Nevo, C. V. Stewart, E. D. Gireesh, D. Plenz and P. J. Basser. (2007) DW-MRI of perfused and thermally controlled neuronal organotypic cultures. In Joint Annual Meeting ISMRM-ESMRMB. Berlin, Germany. 1602. PDF
U. Nevo, E. Özarslan, P. J. Basser. (2007) Rheo-NMR micro-imaging in natural coordinates. In The 9th International Conference on Magnetic Resonance Microscopy. Aachen, Germany. PDF
E. Özarslan, U. Nevo and P. J. Basser. (2007) Anisotropy induced by macroscopic boundaries: Surface normal mapping using DWI. in Proc. Intl. Soc. Mag. Reson. Med. 15.p. 1516. PDF
U. Nevo, M. Komlosh, E. Özarslan, C. G. Koay and P. J. Basser. (2007) The effect of linear and micro-circular shear flow on diffusion MR measurements. In Joint Annual Meeting ISMRM-ESMRMB. Berlin, Germany. 1603. PDF
Sarlls, J.E., Trouard, T.P. and Pierpaoli, C. (2007) Mixed-CPMG Radial-FSE for Diffusion Imaging at 3T. In Joint Annual Meeting ISMRM-ESMRMB. Berlin, Germany. 1491. PDF
J. D. Carew, G. Wahba, and P. J. Basser. (2007) Implications of Heterogeneous Variance of Tensor-Derived Quantities for Group Comparisons. Proc. Intl. Soc. Mag. Reson. Med. 15. 1598.PDF
Y. Assaf, and P. J. Basser. (2007) Non Parametric Approach for Axon Diameter Distribution Estimation from Diffusion Measurements. Proc. Intl. Soc. Mag. Reson. Med. 15. 1536. PDF
A. Bar-Shir, L. Avram, Y. Assaf, P. J. Basser, and Y. Cohen. (2007) Experimental Parameters and Diffraction Patterns at High q Diffusion MR: Experiments and Theoretical Simulations. Proc. Intl. Soc. Mag. Reson. Med. 15. 1530. PDF
D. K. Jones, C. G. Koay, and P. J. Basser. (2007) It is Not Possible to Design a Rotationally Invariant Sampling Scheme for DT-MRI. Proc. Intl. Soc. Mag. Reson. Med. 15. 5. PDF
Miranda, P.C., L. Correia, R. Salvador, and P.J. Basser. 2007. The Role of Tissue Heterogeneity in Neural Stimulation by Applied Electric Fields. In 29th IEEE EMBS Annual International Conference. PDF
Silva, S., P.J. Basser, and P.C. Miranda. 2007. The Activation Function of TMS on a Finite Element Model of a Cortical Sulcus. In 29th IEEE EMBS Annual International Conference. PDF
D.C. Lin, E.K. Dimitriadis and F. Horkay. (2007) Elasticity of Cartilage Measured by Large Strain, Non-Hertzian AFM Nanoindentation. In Proceedings of the ASME Summer Bioengineering Conference [on CD-ROM], Abstract No. SBC2007-176618. PDF
D.C. Lin, C.C. Silva, E.K. Dimitriadis, I. Horkayne-Szakaly, P.J. Basser and F. Horkay. (2007) Integrative Study of Cartilage Chemical and Physical Properties. In Experimental Biology Annual Meeting Abstracts, The FASEB Journal, Volume 2, Issue 6, p. 1b14. PDF
D.C. Lin, E.K. Dimitriadis and F. Horkay. (2007) Adhesive and Nonadhesive, Large Strain AFM Indentation of Rubber-like Materials. In Materials Research Society Symposium Proceedings, Volume 1021E, Paper No. 1021-HH01-06. PDF
D.C. Lin, E.K. Dimitriadis, C.C. Silva, I. Horkayne-Szakaly, P.J. Basser, and F. Horkay. (2007) Swelling and Biomechanical Properties of Tissue-engineered Cartilage. In Proceedings of the Biophysical Society Annual Meeting [on CD-ROM], Abstract No. 1575. PDF
D.C. Lin, E.K. Dimitriadis and F. Horkay. (2007) Elastic Modulus Maps of Soft, Rubber-like Gels and Tissues from AFM Nanoindentation. In Proceedings of the Biophysical Society Annual Meeting [on CD-ROM], Abstract No. 2451. PDF
R.Z. Freidlin, Y. Assaf, and P.J. Basser, "Multivariate hypothesis testing of DTI data for tissue clustering," IEEE Int. Symp. Boimed. Imag.: Macro to Nano (ISBI), pp. 776-779, Apr. 2007. PDF
R.Z. Freidlin, M.E. Komlosh, M.H. Loew, and P.J. Basser,"Parsimonious model selection for tissue classification: A DTI study of zebrafish," Medical Imaging 2007: Image Processing. Edited by Pluim, Josien P. W.; Reinhardt, Joseph M.. Proceedings of the SPIE, Volume 6512, pp. 65122T, Mar. 2007. PDF
R.Z. Freidlin, Y. Assaf, and P.J. Basser, "Multivariate hypothesis testing for tissue clustering and classification: A DTI study of excised rat spinal cord," in Joint Annu. Meeting ISMRM-ESMEMB, p625, May 2007. PDF
R. Z. Freidlin, E. Özarslan, M. E. Komlosh, L.-C. Chang, C. G. Koay, D. K. Jones, and P. J. Basser, “Parsimonious model selection for DTI tissue segmentation and classification: Study on simulated and experimental data,” in Joint Annu. Meeting ISMRM-ESMEMB, p1868, May 2007. PDF
Horkay, F. Similarities and Differences between the Behavior of Synthetic and Biopolymer Gels. American Physical Society Conference, Baltimore, MD, March 13-17, 2006.
Horkay, F.; Basser, P.J.; Hecht, A.M.; Geissler, E. Similarities between the Osmotic and Scattering Properties of Synthetic and Biopolymer Gels. ACS National Meeting, March 26-30, 2006. Atlanta, GA. Polymeric Materials: Science & Engineering, Vol. 94, 668-669 (2006).
Horkay, F.; Dimitriadis, E. K.; Horkayne-Szakaly, I.; Lin, D. C.; Basser, P. J. Osmotic and Mechanical Properties of Cartilage. 231st ACS National Meeting, March 26-30, 2006. Atlanta, GA. Biological Chemistry Division, Abstracts.
Horkay, F.; Basser, P.J.; Hecht, A.M.; Geissler, E. Comparative Study of Scattering and Osmotic Properties of Synthetic and Biopolymer Gels. POLYMER NETWORKS 2006, 18th Polymer Networks Group Conference, Sheffield, UK. September 3-7, 2006, Abstracts. PDF
Geissler, E.; Basser, P.J.; Hecht, A.M.; Horkay, F. ASAXS Determination of Ion Distribution around a Polyelectrolyte Biopolymer in Salt Solution. POLYMER NETWORKS 2006, 18th Polymer Networks Group Conference, Sheffield, UK. September 3-7, 2006, Abstracts.
Horkay, F. Similarities between the Osmotic and Structural Properties of Biopolymer Solutions and Gels. 232nd ACS National Meeting, San Francisco, CA. September 10-14, 2006. Polym. Preprints 47 (2) pp. 103-104 (2006). PDF
M. E. Komlosh, M. J. Lizak, F. Horkay, R. Z. Friedlin, and P. J. Basser. (2006) Detection of local anisotropy using double-PGSE filtered imaging. In 47th ENC. PDF
P.J. Basser, T. Blumenfeld, G. Levin, Y. Yovel, and Y. Assaf. (2006) AxCaliber: An MRI Method to Measure the Diameter Distribution and Density of Axons in Neuronal Tissue. In 8th International Bologna Conference on Magnetic Resonance in Porous Media, P37. PDF
Chang L-C., Pierpaoli C., and Basser P.J. (2006) The Variance of DTI-derived Parameters via First-Order Perturbation Methods. In Proc. Intl. Soc. Mag. Reson. Med. 14, p 1628. PDF
Y. Assaf, T. Blumenfeld, G. Levin, Y. Yovel, P. J. Basser. (2006) AxCaliber – A Method to Measure the Axon Diameter Distribution and Density in Neuronal Tissues. Proc. Intl. Soc. Mag. Reson. Med. 14. 637. PDF
Cahn, S.J., S. Pajevic, and P.J. Basser. 2006. Imaging the Performance: Analyzing Music with a Similarity Matrix. In Society for Music Theory National Conference. Los Angeles. PDF
Koay, C.G., L. Chang, C. Pierpaoli, P. J. Basser. Error Propagation Framework for Diffusion Tensor Imaging. In 14th ISMRM. Seattle, Washington. 1067. PDF
U. Nevo and E. Hauben. (2006) The Symmetry of Self-Tolerance: New Insights Using Classical Concepts. In Keystone Symposia on Tolerance, Autoimmunity and Immune Regulation. Breckenridge, Colorado. PDF
Özarslan, E., Shepherd, T.M., Vemuri, B.C., Blackband, S.J. and Mareci, T.H. (2006) A nonparametric reconstruction and its matrix implementation for the diffusion orientation transform (DOT). in Proc. of IEEE International Symposium on Biomedical Imaging: Macro to Nano, Arlington, VA, 3:85-88. PDF
Özarslan, E., Shepherd, T.M., Vemuri, B.C., Blackband, S.J. and Mareci, T.H. (2006) From ADC to probability profiles: the diffusion orientation transform (DOT). in Proc. Intl. Soc. Mag. Reson. Med., Seattle, WA, 14:1028. PDF
Özarslan, E., Vemuri, B.C. and Blackband, S.J. (2006) Extension of the diffusion orientation transform (DOT) to multiexponential signal attenuation. in Proc. Intl. Soc. Mag. Reson. Med., Seattle, WA, 14:713. PDF
Özarslan, E., Basser, P.J., Shepherd, T.M., Thelwall, P.E., Vemuri, B.C. and Blackband, S.J. T.H. (2006) Characterization of anomalous diffusion from MR signal may be a new probe to tissue microstructure. in Proc. of the Intl. Conf. IEEE Engineering in Medicine and Biology Society (EMBS), New York City, NY, 28:2256-2259. PDF
V. Pickalov, and P. J. Basser (2006). 3-D tomographic reconstruction of the average propagator from MRI data. In Third IEEE International Symposium on Biomedical Imaging: From Macro to Nano, Arlington, VA (ISBI'06). pp.710-713. PDF
Silva, S., P.J. Basser, and P.C. Miranda. 2006. A Study of the Activating Functions for Neuronal Stimulation by TMS. In Biomag. PDF
Lin, D.C., E.K. Dimitriadis, and F. Horkay. 2006. Strategies for Automated Extraction of Young's Moduli of Soft Materials from AFM Force Curves: Application to Cartilage. In ASME Summer Bioengineering Conference, Amelia Island, Florida. PDF
Lin, D.C., E.K. Dimitriadis, I. Horkayne-Szakaly, and F. Horkay. 2006. Elastic and Osmotic Properties of Articular Cartilage. In American Physical Society March Meeting. Baltimore, Maryland. PDF
Horkay, F.; Basser, P.J., Hecht, A.M.; Geissler, E. Comparison between the Effect of Calcium Ions on the Osmotic Properties of Synthetic and Biopolymer Gels. 229th ACS National Meeting, San Diego, CA. March 13-17, 2005, Polym. Preprints 2005, Vol.46 (1) pp. 127-128. PDF
Horkay, F.; Horkayne-Szakaly, I.; Basser, P.J. Measurement of the Osmotic Properties of Biological Tissue Samples. 229th ACS National Meeting, San Diego, CA. March 13-17, 2005, Biotechnology Division, Abstracts.
Horkay, F.; Basser, P.J.; Hecht, A.M.; Geissler, E. Effect of Calcium Ions on the Structure of Synthetic and Biopolymer Gels. 230th ACS National Meeting, Washington, DC. August 28-September 2, 2005, Polymeric Materials: Science & Engineering 93, 105-106 (2005).
Michelman-Ribeiro, A.; Boukari, H.; Nossal, R.; Horkay, F. Probe Diffusion in PVA Solutions and Gels Studied by Fluorescence Correlation Spectroscopy. 230th ACS National Meeting, Washington, DC. August 28-September 2, 2005, Polym. Preprints 2005, Vol.46 (2) pp. 700-701. PDF
Basser, P.J., Horkay, F. Probing Cartilage Constituents at Different Length Scales. MRS Fall Meeting, Biomimetic Polymers and Gels, November 28-December 2, 2005, Boston, MA. Abstracts.
Michelman-Ribeiro, A.; Nossal, R.; Horkay, F.; Boukari, H. Probe Diffusion in Concentrated Polymer Solutions and Gels by Fluorescence Correlation Spectroscopy. MRS Fall Meeting, Biomimetic Polymers and Gels, November 28-December 2, 2005, Boston, MA. Abstracts.
Chang, L-C., Rohde, G.K., and Pierpaoli, C. (2005) An automatic method for estimating noise-induced signal variance in magnitude-reconstructed magnetic resonance images. In Proc. of SPIE 5747:1136–1142. PDF
Rohde, G.K., Barnett, A.S., Basser, P.J., and Pierpaoli, C. (2005) Estimating intensity variance due to noise in registered images. In Proc. of SPIE 5747:655–666. PDF
Chang L-C., Rohde G. K., Basser P.J., and Pierpaoli C. (2005) Automatically Estimating Noise-Induced Signal Variance in Magnitude Reconstructed MRI using Kernel Estimator. In Proc. Intl. Soc. Mag. Reson. Med. 13, p. 2254. PDF
Chang L-C., Rohde G. K., and Basser P.J. (2005) Analytic Expressions for the Uncertainty of DTI-derived Parameters and their Validation Using Monte Carlo Methods. In Proc. Intl. Soc. Mag. Reson. Med. Workshop on Methods for Quantitative Diffusion MRI of Human Brain, Alberta, Canada, March 13-16. 2005. PDF
Chang L-C., Rohde G. K., Pierpaoli C. (2005). An Automatic Method for Estimating Noise-induced Signal Variance in Magnitude-reconstructed Magnetic Resonance Images. In Proceedings of SPIE Medical Imaging, 5747: p1136-1142. PDF
Y. Assaf, R. Z. Freidlin, P. J. Basser. (2005) The Measurement of the Axon Diameter Distribution in White Matter using Diffusion MR Methods. Proc. Intl. Soc. Mag. Reson. Med. 13. 842. PDF
L. Avram, Y. Assaf, P. J. Basser, Y. Cohen. (2005) Finer Discrimination of Fiber Orientation at High q Diffusion MR: Theoretical and Experimental Confirmation. Proc. Intl. Soc. Mag. Reson. Med. 13. 219. PDF
V. Pickalov, P. J. Basser. (2005) 3-D Tomographic Reconstruction of the Average Propagator from Diffusion-Weighted MR Data. Proc. Intl. Soc. Mag. Reson. Med. 13 386. PDF
M. E. Komlosh, R. Z. Freidlin, F. Horkay, Y. Assaf, P. J. Basser. (2005) Detection of microscopic anisotropy in gray matter using d-PGSE. Proc. Intl. Soc. Mag. Reson. Med. 13. 843. PDF
Nevo, U., A. Gothilf, S. Akselrod, M. Neeman and M. Schwartz. (2005) Tracking the Evolution of Experimental Spinal Cord Injury by in-vivo MRI Microscopy. In 13th ISMRM. Toronto, Miami, Florida. 1092 PDF
Komlosh, M. E., M. J. Lizak, F. Horkay, R. Z. Friedlin, and P. J. Basser. 2005. Detection of local anisotropy using double-PGSE filter imaging. In 46th ENC. Providence, RI. PDF
Rohde, G.K., S. Pajevic, and C. Pierpaoli. (2004) Multi-channel registration of diffusion tensor images using directional information. In IEEE International Symposium on Biomedical Imaging. IEEE, Arlington, VA, USA. 712-715.
Rohde, G.K., S. Pajevic, and C. Pierpaoli. (2004) Nonlinear registration of diffusion tensor images using directional information. In ISMRM, Kyoto, Japan. 1213. PDF
Pierpaoli, C., and D.K. Jones. (2004) Removing CSF Contamination in Brain DT-MRIs by Using a Two-Compartment Tensor Model. In Proc. Intl. Soc. Mag. Reson. Med 12:1215. PDF
Jones, D.K., and C. Pierpaoli. (2004) Towards a Marriage of Deterministic and Probabilistic Tractography Methods: Bootstrap Analysis of Fiber Trajectories in the Human Brain. In Proc. Intl. Soc. Mag. Reson. Med 12:1276. PDF
Horkay, F., Basser, P.J.; Hecht, A,M.; Geissler, E. Osmotic Behavior of DNA Gels Swollen in Physiological Salt Solutions. 227th ACS National Meeting, Anaheim, CA. March 28-April 1, 2004. PMSE Preprints 2004, Vol.90, pp. 319-320. PDF
Basser, P.J.; Horkay, F. Characterizing Functional Properties of Extracellular Matrix. POLYMER NETWORKS 2004, 17th Polymer Networks Group Conference, Bethesda, MD, August 15-19, 2004, Abstracts, T02.
Horkay, F.; Hecht, A.M.; Basser, P.J., Geissler, E. Aggrecan: Structure and Dynamics in Solution. POLYMER NETWORKS 2004, 17th Polymer Networks Group Conference, Bethesda, MD, August 15-19, 2004, Abstracts, P07.
Horkayne-Szakaly, I.; Horkay, F.; Basser, P.J. Osmotic Swelling of Tissue Engineered Cartilage Samples. POLYMER NETWORKS 2004, 17th Polymer Networks Group Conference, Bethesda, MD, August 15-19, 2004, Abstracts, P08.
Horkay, F.; Basser, P.J., Hecht, A.M.; Geissler, E. Osmotic and Small-Angle Neutron Scattering Properties of DNA Gels. 228th ACS National Meeting, Philadelphia, PA. August 21-26, 2004, Polym. Preprints 2004, Vol.45 (2), pp. 459-460. PDF
Lin-Gibson, S.; Jones, R.L.; Washburn, N.R.; Horkay, F. Structure-Property Relationships of Photopolymerizable PEGDM Hydrogels. 228th ACS National Meeting, Philadelphia, PA. August 21-26, 2004, Polym. Preprints 2004, Vol.45 (2), pp. 374-375. PDF
Chang L-C., Rohde G. K., Jones D.K., Basser P.J., and Pierpaoli C. (2004) RESTORE: Robust Estimation of Tensors by Outlier Rejection. In Proc. Intl. Soc. Mag. Reson. Med 12. PDF
Y. Assaf, O. Pasternak, P. J. Basser. (2004) Combined DTI and q-Space Analysis at High Angular Resolution of the Human Brain. Proc. Intl. Soc. Mag. Reson. Med. 11. 1200. PDF
S. Pajevic, G. K. Rohde, P. J. Basser, A. Aldroubi. (2004) Non-Homogeneous Wavelet Denoising. Proc. Intl. Soc. Mag. Reson. Med. 11. 2223. PDF
R. Z. Freidlin, H. D. Morris, F. Horkay, C. Pierpaoli, R. Toyama, I. B. Dawid, P. J. Basser. (2004) Diffusion Tensor MR Microscopy of Adult Zebrafish. Proc. Intl. Soc. Mag. Reson. Med. 11. 1755. PDF
D. K. Jones, A. R. Travis, G. M. Eden, C. Pierpaoli, P. J. Basser. (2004) Artifact or Architecture? An Integrated Approach to Visualizing Uncertainty and Partial Volume Effects in DT-MRI Tractography. Proc. Intl. Soc. Mag. Reson. Med. 11. 618. PDF
L. L. Latour, J. A. Butman, J. Bykowski, P. Basser, S. Warach. (2004) Computation of ADC maps from FLAIR b=0 and DWI b=1000 reduces contamination by cerebral spinal fluid with minimal increase in scan time. Proc. Intl. Soc. Mag. Reson. Med. 11. 1191. PDF
D. K. Jones, P. J. Basser. (2004) "Squashing Peanuts and Smashing Pumpkins": How Noise Distorts Diffusion-Weighted MR Data. Proc. Intl. Soc. Mag. Reson. Med. 11. 86. PDF
Basser, P.J., and S. Pajevic. 2004. The Problem with Peanuts. In 12th ISMRM Annual Meeting. Kyoto, Japan. 94. PDF
S. Pajevic, P. J. Basser. (2004) NURBS in DT-MRI. Proc. Intl. Soc. Mag. Reson. Med. 11. 620. PDF
Y. Assaf, R. Z. Freidlin, G. K. Rohde, P. J. Basser. (2004) A New Modeling and Experimental Framework to Characterize Hindered and Restricted Water Diffusion in Brain White Matter. Proc. Intl. Soc. Mag. Reson. Med. 11. 251. PDF
Pierpaoli, C., S. Marenco, G. Rohde, D.K. Jones, and A.S. Barnett. (2003) Analyzing the contribution of cardiac pulsation to the variability of quantities derived from the diffusion tensor. In Proc. Intl. Soc. Mag. Reson. Med 11:70. PDF
Rohde, G.K., Pajevic, S., Pierpaoli, C., and Basser, P.J. (2003) Covariance matrix based elastic multi-channel image registration. In Proc. Intl. Soc. Mag. Reson. Med. 11:615. PDF
Assaf, Y., and Basser, P.J. (2003) Combining DT and q-space MRI: a new model of white matter in the brain. In Proc. Intl. Soc. Mag. Reson. Med. 11:588. PDF
Basser, P.J., and Pajevic, S. (2003) Optimal Design of DT-MRI Experiments Using a New Tensor-variate Gaussian Distribution. In Proc. Intl. Soc. Mag. Reson. Med. 11:2119. PDF
Jones, D.K. (2003) When is a DT-MRI Sampling Scheme Truly Isotropic? In Proc. Intl. Soc. Mag. Reson. Med. 11:2118. PDF
Rohde, G.K., Barnett, A.S., Basser, P.J., Marenco, S., and Pierpaoli, C. (2003) A comprehensive approach for correcting motion and distortion in diffusion weighted MRI. In Proc. Intl. Soc. Mag. Reson. Med. 11:1055. PDF
Jones, D.K, Catani, M., Reeves, S.J., Shergill, S.S., McGuire, P., Horsfield, M.A., Simmons, A., Williams, S.C., and Howard, R.J. (2003) A Tractography Approach to Studying Fronto-Temporal Fasciculi in Schizophrenia and Late Onset Schizophrenia-like Psychosis. In Proc. Intl. Soc. Mag. Reson. Med. 11:244. PDF
K. Potter, R.D. Leapman, P.J. Basser, W.J. Landis. (2001) Bone Formation Studied by Proton NMR Microscopy. Sixth International Conference on Magnetic Resonance Microscopy, Nottingham, England, September 2001. PDF
K. Potter, R.D. Leapman, P.J. Basser, W.J. Landis. (2001) Bone Formation Studied by Proton NMR Microscopy. Proc. Int. Soc. Magn. Reson. Med. 9:2126. Abstract (RTF)
K. Potter, J. Butler, W.E. Horton, R.G.S. Spencer. (1999) Non-invasive Evaluation of Engineered Cartilage Tissue Using Proton NMR Microscopy. Fifth International Conference on Magnetic Resonance Microscopy, Heidelberg, Germany, September 1999. PDF
P.J. Basser. (1998) Fiber-Tractography via Diffusion Tensor MRI (DT-MRI). Proc. Intl. Soc. Mag. Reson. Med. 6. 1226. PDF.
P.J. Basser. (1997) Quantifying Errors in Fiber-Tract Direction and Diffusion Tensor Field Maps Resulting from MR Noise. Proc. Intl. Soc. Mag. Reson. Med. 5. 1740. PDF.
P.J. Basser, M.S. Lewis, and A.J. Grodzinsky. (1996) Electrostatic forces between charged macromolecules measured by equilibrium sedimentation: Relevance to cartilage mechanics. In 42nd Annual Meeting, Orthopaedic Research Society. PDF
P.J. Basser and D. LeBihan. (1992) Fiber orientation mapping in an anisotropic medium with NMR diffusion spectroscopy. In 11th Society of Magnetic Resonance in Medicine Meeting. 1221. PDF
P.J. Basser, J. Mattiello, and D. LeBihan. (1992) Diagonal and off-diagonal components of the self-diffusion tensor: their relation to and estimation from the NMR spin-echo signal. In 11th Society of Magnetic Resonance in Medicine Meeting. 1222. PDF
P.J. Basser and B.J. Roth. (1990) Scaling laws for electromagnetic stimulation of an axon. In Proceedings of the Twelfth Annual International Conference of the IEEE. 2238. PDF
Peter J. Basser, Ph.D.
NIH
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